Monday, October 25, 2010

 

Boolean Network Modeling

"The goal of this software package is to provide intuitive and accessible tools for simulating biological regulatory networks in a boolean formalism. Using this simulator biologist and bioinformaticians can specify their system in a simple textual language then explore various dynamic behaviors via a web interface or an application programming interface (API) each designed to facilitate scientific discovery, data collection and reporting.

The software is primarly distributed as Python source code and requires that Python 2.5 (or later) be installed on the target computer."



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Tuesday, March 03, 2009

 

Mathematica Demos

Wolfram has prepared a very nice showcase with visualizations and implementations of several models (many with discrete dynamical systems, of course) in Mathematica.


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