Monday, March 25, 2024

 

Links for "Genes as Turing Tape" Lecture



Brenner, Sydney. [2012]. "History of Science. The Revolution in the Life Sciences". Science 338 (6113): 1427-8.
Brenner, Sydney. [2012]. "Turing centenary: Life's code script. Nature 482 (7386) (February 22): 461-461.
The virtual Cell
Inside the Cell
Cell Biology at the Biology Project
More on Cells from Wikipedia
The Cell Image Library and highMag
Colonial Algae


Genetics and Genomics

Watson and Crick's Molecular structure of Nucleic Acids 1953 article
Journey into DNA
Cracking the Code of Life (PBS Show)
Explore a stretch of code



Translation and Protein Synthesis
Interactions between the Translation Machinery and Microtubules

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Links for "Computation in Cellular Automata" lecture

Conway's Game of Life

Game of Life Demo
Game of Life Applet
3-D Game of Life
Recursive Universe of Game of Life
Game of Life Reveals Long-Sought Repeating Patterns

Turing Machine Implemented in Game of Life

Rule 110
Rule 110 and Universal Computation
Computation Theory of Cellular Automata
A Computational Mechanics Reading List by Cosma Shalizi

Neural Cellular Automata For Art Recreation

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Lecture Notes Chapter 5: Life is Stranger than Fiction

Reality is Stranger than Fiction: What can Artificial Life do about Advances in Biology?


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Wednesday, March 20, 2024

 

Modeling and managing behavior change in groups: A Boolean network method

"Social influence processes can induce desired or undesired behavior change in individual members of a group. Empirical modeling of group processes and the design of network-based interventions meant to promote desired behavior change is somewhat limited be-cause the models often assume that the social influence is assimilative only and that the networks are not fully connected. We introduce a Boolean network method that addresses these two limitations. In line with dynamical systems principles, temporal changes in group members’ behavior are modeled as a Boolean network that also allows for application of control theory design of group management strategies that might direct the groups to-wards desired behavior". Full paper @ Advances.in/psychology.

eighteen state-transition graphs of models.

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Monday, March 11, 2024

 

links for "Cellular Automata and Edge of Chaos" lecture

Boolean networks beyond Systems Biology: Musical Morphogenesis


Devin Acker's Elementary CA Demo
Cellular Automata rules lexicon at MCell.
Cellular Automata Rules
Cellab
New Kind of Science Applets
Wolfram CA Demos



Langton's Lambda Parameter
Edge Of Chaos CA
Lambda Parameter Applet

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